Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD48P09326 TMBIM7P-203ENST00000641617 1718 ntBASIC16.48■□□□□ 0.23
CD48P09326 AC127383.1-201ENST00000444697 1800 ntBASIC16.47■□□□□ 0.23
CD48P09326 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD48P09326 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.47■□□□□ 0.23
CD48P09326 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.47■□□□□ 0.23
CD48P09326 MTND6P24-201ENST00000440466 518 ntBASIC16.47■□□□□ 0.23
CD48P09326 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.47■□□□□ 0.23
CD48P09326 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.47■□□□□ 0.23
CD48P09326 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.47■□□□□ 0.23
CD48P09326 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CD48P09326 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.47■□□□□ 0.23
CD48P09326 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD48P09326 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.47■□□□□ 0.23
CD48P09326 AL607033.1-201ENST00000623900 1599 ntBASIC16.47■□□□□ 0.23
CD48P09326 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 AC138035.3-201ENST00000622706 2791 ntBASIC16.46■□□□□ 0.23
CD48P09326 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.46■□□□□ 0.23
CD48P09326 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.46■□□□□ 0.23
CD48P09326 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 AL136379.1-201ENST00000623471 2642 ntBASIC16.46■□□□□ 0.23
CD48P09326 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD48P09326 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.46■□□□□ 0.23
CD48P09326 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.46■□□□□ 0.23
CD48P09326 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CD48P09326 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.46■□□□□ 0.23
CD48P09326 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.46■□□□□ 0.23
CD48P09326 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.46■□□□□ 0.23
CD48P09326 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.46■□□□□ 0.23
CD48P09326 AC023511.2-201ENST00000618803 211 ntBASIC16.46■□□□□ 0.23
CD48P09326 LINC00628-201ENST00000628516 1289 ntBASIC16.46■□□□□ 0.23
CD48P09326 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.46■□□□□ 0.23
CD48P09326 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.46■□□□□ 0.23
CD48P09326 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CD48P09326 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD48P09326 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD48P09326 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CD48P09326 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.45■□□□□ 0.22
CD48P09326 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD48P09326 MIR1233-2-201ENST00000408138 82 ntBASIC16.45■□□□□ 0.22
CD48P09326 MIR1233-1-201ENST00000408722 82 ntBASIC16.45■□□□□ 0.22
CD48P09326 SPDYE17-201ENST00000412399 783 ntBASIC16.45■□□□□ 0.22
CD48P09326 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.45■□□□□ 0.22
CD48P09326 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.45■□□□□ 0.22
CD48P09326 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms