Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 AL596442.2-201ENST00000610240 980 ntBASIC14.66□□□□□ -0.06
THBS1P07996 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
THBS1P07996 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
THBS1P07996 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
THBS1P07996 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.66□□□□□ -0.06
THBS1P07996 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.66□□□□□ -0.06
THBS1P07996 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.66□□□□□ -0.06
THBS1P07996 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
THBS1P07996 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
THBS1P07996 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
THBS1P07996 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
THBS1P07996 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.65□□□□□ -0.06
THBS1P07996 AL627223.1-201ENST00000416693 442 ntBASIC14.65□□□□□ -0.06
THBS1P07996 CNN2P11-201ENST00000429351 262 ntBASIC14.65□□□□□ -0.06
THBS1P07996 METTL21AP1-201ENST00000438852 635 ntBASIC14.65□□□□□ -0.06
THBS1P07996 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.65□□□□□ -0.06
THBS1P07996 AP000344.2-201ENST00000512987 629 ntBASIC14.65□□□□□ -0.06
THBS1P07996 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
THBS1P07996 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.65□□□□□ -0.06
THBS1P07996 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
THBS1P07996 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
THBS1P07996 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
THBS1P07996 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
THBS1P07996 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.65□□□□□ -0.06
THBS1P07996 AC006058.4-201ENST00000624016 1670 ntBASIC14.65□□□□□ -0.06
THBS1P07996 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.65□□□□□ -0.07
THBS1P07996 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 CYMP-203ENST00000474680 1263 ntBASIC14.64□□□□□ -0.07
THBS1P07996 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
THBS1P07996 HNRNPUP1-201ENST00000554987 333 ntBASIC14.64□□□□□ -0.07
THBS1P07996 AL109954.1-202ENST00000564051 2148 ntBASIC14.64□□□□□ -0.07
THBS1P07996 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.64□□□□□ -0.07
THBS1P07996 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.64□□□□□ -0.07
THBS1P07996 AC018529.1-201ENST00000613063 361 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms