Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RETP07949 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RETP07949 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.02■□□□□ 0.16
RETP07949 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.02■□□□□ 0.16
RETP07949 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RETP07949 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.02■□□□□ 0.16
RETP07949 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.02■□□□□ 0.16
RETP07949 RPL7P3-201ENST00000441388 714 ntBASIC16.02■□□□□ 0.16
RETP07949 AL139010.1-201ENST00000454878 894 ntBASIC16.02■□□□□ 0.16
RETP07949 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.02■□□□□ 0.16
RETP07949 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.02■□□□□ 0.16
RETP07949 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.02■□□□□ 0.16
RETP07949 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.02■□□□□ 0.16
RETP07949 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.02■□□□□ 0.16
RETP07949 RHOQP1-201ENST00000555758 579 ntBASIC16.02■□□□□ 0.16
RETP07949 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.02■□□□□ 0.16
RETP07949 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.02■□□□□ 0.16
RETP07949 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RETP07949 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
RETP07949 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.02■□□□□ 0.15
RETP07949 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RETP07949 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RETP07949 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.02■□□□□ 0.15
RETP07949 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RETP07949 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.02■□□□□ 0.15
RETP07949 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RETP07949 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
RETP07949 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.02■□□□□ 0.15
RETP07949 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RETP07949 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RETP07949 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.01■□□□□ 0.15
RETP07949 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
RETP07949 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
RETP07949 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
RETP07949 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RETP07949 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.01■□□□□ 0.15
RETP07949 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.01■□□□□ 0.15
RETP07949 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.01■□□□□ 0.15
RETP07949 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.01■□□□□ 0.15
RETP07949 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.01■□□□□ 0.15
RETP07949 TDH-203ENST00000531764 1110 ntBASIC16.01■□□□□ 0.15
RETP07949 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 MIR5189-201ENST00000577370 114 ntBASIC16.01■□□□□ 0.15
RETP07949 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 AC133539.2-201ENST00000604757 467 ntBASIC16.01■□□□□ 0.15
RETP07949 CU634019.7-201ENST00000624153 1185 ntBASIC16.01■□□□□ 0.15
RETP07949 FP236241.2-201ENST00000624906 1185 ntBASIC16.01■□□□□ 0.15
RETP07949 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RETP07949 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RETP07949 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RETP07949 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RETP07949 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RETP07949 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
RETP07949 AC092364.2-201ENST00000596710 2692 ntBASIC16.01■□□□□ 0.15
RETP07949 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.01■□□□□ 0.15
RETP07949 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RETP07949 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16■□□□□ 0.15
RETP07949 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms