Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
RB1P06400 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 MTX1P1-201ENST00000440904 838 ntBASIC16.67■□□□□ 0.26
RB1P06400 BX284668.4-201ENST00000453917 508 ntBASIC16.67■□□□□ 0.26
RB1P06400 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.67■□□□□ 0.26
RB1P06400 GAPDHP40-201ENST00000505218 1006 ntBASIC16.67■□□□□ 0.26
RB1P06400 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.67■□□□□ 0.26
RB1P06400 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.67■□□□□ 0.26
RB1P06400 AC104982.3-201ENST00000581995 514 ntBASIC16.67■□□□□ 0.26
RB1P06400 EEF1DP1-201ENST00000585891 896 ntBASIC16.67■□□□□ 0.26
RB1P06400 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.67■□□□□ 0.26
RB1P06400 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 AC005695.3-201ENST00000614522 232 ntBASIC16.67■□□□□ 0.26
RB1P06400 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.67■□□□□ 0.26
RB1P06400 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RB1P06400 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RB1P06400 KRT8P35-201ENST00000483942 1338 ntBASIC16.67■□□□□ 0.26
RB1P06400 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
RB1P06400 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 MIR4741-201ENST00000579822 90 ntBASIC16.66■□□□□ 0.26
RB1P06400 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 AC020914.3-201ENST00000594712 304 ntBASIC16.66■□□□□ 0.26
RB1P06400 AL021578.1-201ENST00000613646 709 ntBASIC16.66■□□□□ 0.26
RB1P06400 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RB1P06400 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RB1P06400 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RB1P06400 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 PRORSD1P-202ENST00000563365 2154 ntBASIC16.65■□□□□ 0.26
RB1P06400 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 AL662890.1-201ENST00000396818 632 ntBASIC16.65■□□□□ 0.26
RB1P06400 MIR1202-201ENST00000408529 83 ntBASIC16.65■□□□□ 0.26
RB1P06400 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 RPSAP36-202ENST00000494591 1261 ntBASIC16.65■□□□□ 0.26
RB1P06400 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RB1P06400 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.65■□□□□ 0.26
RB1P06400 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.65■□□□□ 0.26
RB1P06400 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms