Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRGV3P03979 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRGV3P03979 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV3P03979 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV3P03979 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV3P03979 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.57□□□□□ -0.4
TRGV3P03979 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRGV3P03979 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 AP003680.1-201ENST00000598970 3660 ntBASIC12.57□□□□□ -0.4
TRGV3P03979 TSPY26P-202ENST00000565928 3884 ntBASIC12.57□□□□□ -0.4
TRGV3P03979 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.57□□□□□ -0.4
TRGV3P03979 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.57□□□□□ -0.4
TRGV3P03979 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRGV3P03979 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRGV3P03979 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 AL691432.1-201ENST00000596308 1422 ntBASIC12.56□□□□□ -0.4
TRGV3P03979 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.56□□□□□ -0.4
TRGV3P03979 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 KLF2P3-201ENST00000451977 1087 ntBASIC12.56□□□□□ -0.4
TRGV3P03979 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 RN7SL828P-201ENST00000607615 303 ntBASIC12.56□□□□□ -0.4
TRGV3P03979 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.56□□□□□ -0.4
TRGV3P03979 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.56□□□□□ -0.4
TRGV3P03979 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRGV3P03979 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRGV3P03979 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRGV3P03979 LINC02447-202ENST00000501888 2146 ntBASIC12.56□□□□□ -0.4
TRGV3P03979 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms