Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COL1A1P02452 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 BAATP1-201ENST00000412284 1225 ntBASIC18.86■□□□□ 0.61
COL1A1P02452 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL1A1P02452 PFN1P12-201ENST00000455938 534 ntBASIC18.86■□□□□ 0.61
COL1A1P02452 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 DUX4L45-201ENST00000566406 1057 ntBASIC18.86■□□□□ 0.61
COL1A1P02452 AP001063.1-201ENST00000568332 529 ntBASIC18.86■□□□□ 0.61
COL1A1P02452 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
COL1A1P02452 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COL1A1P02452 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.86■□□□□ 0.61
COL1A1P02452 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL1A1P02452 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COL1A1P02452 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL1A1P02452 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.85■□□□□ 0.61
COL1A1P02452 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 RNU1-114P-201ENST00000365297 166 ntBASIC18.85■□□□□ 0.61
COL1A1P02452 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.85■□□□□ 0.61
COL1A1P02452 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.85■□□□□ 0.61
COL1A1P02452 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
COL1A1P02452 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.85■□□□□ 0.61
COL1A1P02452 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.85■□□□□ 0.61
COL1A1P02452 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.85■□□□□ 0.61
COL1A1P02452 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL1A1P02452 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL1A1P02452 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.85■□□□□ 0.61
COL1A1P02452 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL1A1P02452 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 MIR1247-201ENST00000408206 136 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 AP001582.1-201ENST00000525856 295 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
COL1A1P02452 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 RHOXF1P1-202ENST00000635473 501 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 AC134312.5-201ENST00000568031 1313 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.84■□□□□ 0.61
COL1A1P02452 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.84■□□□□ 0.61
COL1A1P02452 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.84■□□□□ 0.61
COL1A1P02452 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 AC025181.2-201ENST00000606994 802 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COL1A1P02452 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.84■□□□□ 0.61
COL1A1P02452 AL139099.5-201ENST00000635274 300 ntBASIC18.84■□□□□ 0.61
COL1A1P02452 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL1A1P02452 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
COL1A1P02452 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL1A1P02452 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms