Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.22■□□□□ 0.03
GFRA3O60609 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC15.22■□□□□ 0.03
GFRA3O60609 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 ZACNP1-201ENST00000612259 710 ntBASIC15.22■□□□□ 0.03
GFRA3O60609 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GFRA3O60609 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 AL354751.1-201ENST00000412768 1863 ntBASIC15.22■□□□□ 0.03
GFRA3O60609 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
GFRA3O60609 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GFRA3O60609 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.22■□□□□ 0.03
GFRA3O60609 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
GFRA3O60609 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 ACTBP7-201ENST00000418351 1124 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GFRA3O60609 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.21■□□□□ 0.03
GFRA3O60609 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 SERBP1P2-201ENST00000436888 1164 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 HIST2H2BB-201ENST00000449108 381 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 ALG1L6P-201ENST00000515248 758 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.21■□□□□ 0.03
GFRA3O60609 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
GFRA3O60609 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.21■□□□□ 0.03
GFRA3O60609 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 AC007881.3-201ENST00000608897 607 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 AL136295.7-201ENST00000619226 1200 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 MIR6858-201ENST00000620733 67 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 NAP1L6-202ENST00000641404 1222 ntBASIC15.21■□□□□ 0.03
GFRA3O60609 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GFRA3O60609 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GFRA3O60609 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GFRA3O60609 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
GFRA3O60609 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.21■□□□□ 0.02
GFRA3O60609 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GFRA3O60609 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
GFRA3O60609 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 KRT8P4-201ENST00000509735 1454 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms