Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.94□□□□□ -0.66
NDUFA1O15239 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.94□□□□□ -0.66
NDUFA1O15239 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 MIR1224-201ENST00000408193 85 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.94□□□□□ -0.66
NDUFA1O15239 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 AC021087.4-201ENST00000563761 564 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.94□□□□□ -0.66
NDUFA1O15239 AC025062.2-201ENST00000605477 670 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 AC112693.3-201ENST00000624819 1983 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.93□□□□□ -0.66
NDUFA1O15239 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.93□□□□□ -0.66
NDUFA1O15239 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.93□□□□□ -0.66
NDUFA1O15239 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.93□□□□□ -0.66
NDUFA1O15239 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.93□□□□□ -0.66
NDUFA1O15239 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.93□□□□□ -0.66
NDUFA1O15239 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
NDUFA1O15239 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms