Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.87■□□□□ 0.29
CAPN9O14815 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.87■□□□□ 0.29
CAPN9O14815 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.87■□□□□ 0.29
CAPN9O14815 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
CAPN9O14815 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN9O14815 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.87■□□□□ 0.29
CAPN9O14815 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.87■□□□□ 0.29
CAPN9O14815 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CAPN9O14815 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CAPN9O14815 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CAPN9O14815 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.86■□□□□ 0.29
CAPN9O14815 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.86■□□□□ 0.29
CAPN9O14815 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.86■□□□□ 0.29
CAPN9O14815 AC069120.2-201ENST00000524091 540 ntBASIC16.86■□□□□ 0.29
CAPN9O14815 AC140878.1-201ENST00000565277 250 ntBASIC16.86■□□□□ 0.29
CAPN9O14815 AC051619.7-201ENST00000568314 623 ntBASIC16.86■□□□□ 0.29
CAPN9O14815 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.86■□□□□ 0.29
CAPN9O14815 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 AL691432.1-201ENST00000596308 1422 ntBASIC16.86■□□□□ 0.29
CAPN9O14815 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 AP001282.1-201ENST00000531301 1499 ntBASIC16.86■□□□□ 0.29
CAPN9O14815 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.86■□□□□ 0.29
CAPN9O14815 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CAPN9O14815 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN9O14815 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN9O14815 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN9O14815 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 AL136982.4-201ENST00000437689 1740 ntBASIC16.85■□□□□ 0.29
CAPN9O14815 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CAPN9O14815 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CAPN9O14815 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN9O14815 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN9O14815 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.85■□□□□ 0.29
CAPN9O14815 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN9O14815 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.85■□□□□ 0.29
CAPN9O14815 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.85■□□□□ 0.29
CAPN9O14815 AL589739.1-201ENST00000607720 493 ntBASIC16.85■□□□□ 0.29
CAPN9O14815 AC093512.1-201ENST00000617969 520 ntBASIC16.85■□□□□ 0.29
CAPN9O14815 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.85■□□□□ 0.29
CAPN9O14815 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 DBET-201ENST00000630918 3363 ntBASIC16.85■□□□□ 0.29
CAPN9O14815 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CAPN9O14815 CETN4P-206ENST00000642099 2168 ntBASIC16.85■□□□□ 0.29
CAPN9O14815 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms