Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.97■□□□□ 0.31
O00370 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
O00370 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.97■□□□□ 0.31
O00370 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.97■□□□□ 0.31
O00370 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.97■□□□□ 0.31
O00370 AC092580.3-201ENST00000430932 139 ntBASIC16.97■□□□□ 0.31
O00370 HIST3H2BA-201ENST00000436555 524 ntBASIC16.97■□□□□ 0.31
O00370 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.97■□□□□ 0.31
O00370 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.97■□□□□ 0.31
O00370 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.97■□□□□ 0.31
O00370 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
O00370 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.97■□□□□ 0.31
O00370 AL158211.3-201ENST00000607385 239 ntBASIC16.97■□□□□ 0.31
O00370 AC073592.8-201ENST00000624126 511 ntBASIC16.97■□□□□ 0.31
O00370 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 FO538757.1-201ENST00000623083 1397 ntBASIC16.97■□□□□ 0.31
O00370 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.97■□□□□ 0.31
O00370 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
O00370 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
O00370 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
O00370 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
O00370 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 AC018892.3-201ENST00000623986 2499 ntBASIC16.96■□□□□ 0.31
O00370 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
O00370 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
O00370 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
O00370 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.96■□□□□ 0.31
O00370 TREML5P-201ENST00000421694 576 ntBASIC16.96■□□□□ 0.31
O00370 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.96■□□□□ 0.31
O00370 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
O00370 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.96■□□□□ 0.31
O00370 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.96■□□□□ 0.31
O00370 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 TEX28P1-201ENST00000613479 1221 ntBASIC16.96■□□□□ 0.31
O00370 TEX28P2-201ENST00000617764 1221 ntBASIC16.96■□□□□ 0.31
O00370 AC093512.1-201ENST00000617969 520 ntBASIC16.96■□□□□ 0.31
O00370 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.96■□□□□ 0.31
O00370 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.96■□□□□ 0.31
O00370 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
O00370 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
O00370 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
O00370 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
O00370 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
O00370 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
O00370 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
O00370 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.95■□□□□ 0.3
O00370 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
O00370 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
O00370 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.95■□□□□ 0.3
O00370 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 DBET-201ENST00000630918 3363 ntBASIC16.95■□□□□ 0.3
O00370 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
O00370 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
O00370 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.95■□□□□ 0.3
O00370 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 MIR943-201ENST00000401286 94 ntBASIC16.95■□□□□ 0.3
O00370 AZGP1P1-201ENST00000411909 902 ntBASIC16.95■□□□□ 0.3
O00370 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.95■□□□□ 0.3
O00370 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.95■□□□□ 0.3
O00370 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.95■□□□□ 0.3
O00370 AC097493.3-201ENST00000509725 367 ntBASIC16.95■□□□□ 0.3
O00370 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.95■□□□□ 0.3
O00370 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.95■□□□□ 0.3
O00370 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.95■□□□□ 0.3
O00370 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.95■□□□□ 0.3
O00370 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
O00370 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
O00370 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms