Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 BANF1P1-201ENST00000553684 263 ntBASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 KRT8P37-201ENST00000451609 1420 ntBASIC19.5■□□□□ 0.71
TRIM6-TRIM34B2RNG4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC092127.1-201ENST00000567093 3455 ntBASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 MTND6P24-201ENST00000440466 518 ntBASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 LINC00628-201ENST00000628516 1289 ntBASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AP001059.3-201ENST00000619053 235 ntBASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AC079781.4-201ENST00000641908 219 ntBASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM6-TRIM34B2RNG4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM6-TRIM34B2RNG4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM6-TRIM34B2RNG4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM6-TRIM34B2RNG4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM6-TRIM34B2RNG4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM6-TRIM34B2RNG4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms