Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC092364.2-201ENST00000596710 2692 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 KRT18P64-201ENST00000434946 1219 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC007274.1-201ENST00000439805 662 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 FAM86LP-201ENST00000478302 853 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC106886.1-201ENST00000568660 600 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PCDHA14-201ENST00000506751 2298 ntBASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 AL118508.1-201ENST00000613502 2345 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 AL662844.4-201ENST00000606367 2838 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TOMM22P5-201ENST00000416399 439 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TMEM14DP-201ENST00000422205 345 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 AL391069.4-201ENST00000609583 481 ntBASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3FA6NER0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 KRT8P22-201ENST00000562317 1415 ntBASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3FA6NER0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms