Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 AC104989.1-201ENST00000519711 778 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 AP001889.1-201ENST00000525414 633 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 SNX29P1-201ENST00000548357 1007 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 MIR6775-201ENST00000617557 69 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 AC005252.2-201ENST00000624630 1141 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 AL662844.4-201ENST00000606367 2838 ntBASIC13.86□□□□□ -0.19
MBD3L3A6NE82 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
MBD3L3A6NE82 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 BAATP1-201ENST00000412284 1225 ntBASIC13.85□□□□□ -0.19
MBD3L3A6NE82 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 AC012441.1-201ENST00000446669 685 ntBASIC13.85□□□□□ -0.19
MBD3L3A6NE82 AL355864.2-201ENST00000447420 863 ntBASIC13.85□□□□□ -0.19
MBD3L3A6NE82 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 AC107373.2-201ENST00000607735 490 ntBASIC13.85□□□□□ -0.19
MBD3L3A6NE82 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
MBD3L3A6NE82 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 AC006449.5-201ENST00000610658 2098 ntBASIC13.84□□□□□ -0.19
MBD3L3A6NE82 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ACKR1-201ENST00000368121 1240 ntBASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 GAPDHP40-201ENST00000505218 1006 ntBASIC13.84□□□□□ -0.19
MBD3L3A6NE82 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.84□□□□□ -0.19
MBD3L3A6NE82 MIR4259-201ENST00000584466 101 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms