Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 KRT16P4-201ENST00000453883 522 ntBASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 AC012569.1-201ENST00000591191 1524 ntBASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 LINC01101-201ENST00000622953 1884 ntBASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.72□□□□□ -0.21
MEIS3P1A6NDR6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MEIS3P1A6NDR6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.71□□□□□ -0.22
MEIS3P1A6NDR6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 AC129492.6-201ENST00000611383 1305 ntBASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 AC007191.1-201ENST00000623179 2995 ntBASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MEIS3P1A6NDR6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms