Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGB6Q9Y5F9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 FAM207CP-201ENST00000443486 507 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 RARRES2P9-201ENST00000565168 469 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AL138918.1-201ENST00000568306 659 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AC018529.1-201ENST00000613063 361 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 LINC01144-201ENST00000626198 1710 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 ME2P1-201ENST00000426028 1970 ntBASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGB6Q9Y5F9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDHGB6Q9Y5F9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms