Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 BCRP1-201ENST00000444246 691 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AC025048.3-201ENST00000590609 569 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AC008738.7-201ENST00000609744 511 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AC005702.4-201ENST00000618393 416 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 AC007950.2-201ENST00000615045 2347 ntBASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGC4Q9Y5F7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 TARDBPP1-201ENST00000442013 1203 ntBASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 HNRNPUP1-201ENST00000554987 333 ntBASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 MIR4313-201ENST00000580760 101 ntBASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AC097359.3-201ENST00000603982 1210 ntBASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AL096865.1-201ENST00000606796 927 ntBASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC4Q9Y5F7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms