Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 OR2I1P-209ENST00000641730 5365 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MYO15B-237ENST00000642007 4893 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC009090.5-201ENST00000624886 2285 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 PRELID1P1-202ENST00000567272 903 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC002347.1-201ENST00000569543 541 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AL078644.1-201ENST00000609881 752 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AC126365.1-201ENST00000578585 1514 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AGAP7P-201ENST00000582299 2062 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AGAP14-201ENST00000624701 2060 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 KRT8P44-201ENST00000441609 1350 ntBASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
UBE2D4Q9Y2X8 AP002414.3-201ENST00000589352 1468 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC013726.1-201ENST00000563747 2285 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PMS2P7-201ENST00000506558 1336 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC026396.1-201ENST00000419388 421 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 GPX1P2-201ENST00000429271 606 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 PRSS29P-201ENST00000440800 595 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 HCG4P8-203ENST00000443049 980 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 RNPS1P1-201ENST00000507437 918 ntBASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
UBE2D4Q9Y2X8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms