Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 MIR648-201ENST00000385046 94 ntBASIC14.98□□□□□ -0.01
CTSFQ9UBX1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 TIMM17BP1-201ENST00000545713 516 ntBASIC14.98□□□□□ -0.01
CTSFQ9UBX1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 AL358472.5-202ENST00000641448 1267 ntBASIC14.98□□□□□ -0.01
CTSFQ9UBX1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 MTHFR-217ENST00000641820 1569 ntBASIC14.98□□□□□ -0.01
CTSFQ9UBX1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CTSFQ9UBX1 AL391825.1-201ENST00000457671 1364 ntBASIC14.98□□□□□ -0.01
CTSFQ9UBX1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC018892.3-201ENST00000623986 2499 ntBASIC14.97□□□□□ -0.01
CTSFQ9UBX1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC087499.6-201ENST00000411576 835 ntBASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC074338.1-201ENST00000416825 156 ntBASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 TARDBPP1-201ENST00000442013 1203 ntBASIC14.97□□□□□ -0.01
CTSFQ9UBX1 GAPDHP21-201ENST00000450301 1010 ntBASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CTSFQ9UBX1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms