Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KRT19P2-202ENST00000557173 1012 ntBASIC15.71■□□□□ 0.11
MKS1Q9NXB0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 AL138918.1-201ENST00000568306 659 ntBASIC15.71■□□□□ 0.11
MKS1Q9NXB0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 FER1L4-210ENST00000615531 5998 ntBASIC15.71■□□□□ 0.11
MKS1Q9NXB0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MKS1Q9NXB0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MKS1Q9NXB0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 RPL5P21-201ENST00000404620 815 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC116407.3-201ENST00000623905 1129 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC004877.2-201ENST00000623941 599 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 CYP4F24P-201ENST00000586049 1580 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 AP002414.2-201ENST00000591780 3365 ntBASIC15.7■□□□□ 0.1
MKS1Q9NXB0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MKS1Q9NXB0 BCAR1-209ENST00000546196 1340 ntBASIC15.69■□□□□ 0.1
MKS1Q9NXB0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 FAM220BP-201ENST00000377689 816 ntBASIC15.69■□□□□ 0.1
MKS1Q9NXB0 AC002056.1-201ENST00000395613 760 ntBASIC15.69■□□□□ 0.1
MKS1Q9NXB0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.69■□□□□ 0.1
MKS1Q9NXB0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms