Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PARPBPQ9NWS1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AC004987.2-201ENST00000395959 1148 ntBASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AC107890.1-201ENST00000422478 521 ntBASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AC125807.1-201ENST00000483097 614 ntBASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AC140878.1-201ENST00000565277 250 ntBASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 RN7SL828P-201ENST00000607615 303 ntBASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PARPBPQ9NWS1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PARPBPQ9NWS1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms