Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TREX1Q9NSU2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.84■□□□□ 0.13
TREX1Q9NSU2 AC103702.1-201ENST00000548801 2630 ntBASIC15.83■□□□□ 0.13
TREX1Q9NSU2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREX1Q9NSU2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TREX1Q9NSU2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.83■□□□□ 0.13
TREX1Q9NSU2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 KRT18P13-201ENST00000400056 1290 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AL080243.2-201ENST00000418783 582 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AL645939.2-201ENST00000427340 991 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AC109322.1-201ENST00000524499 1264 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SNHG9-202ENST00000564014 471 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 AL596442.2-201ENST00000610240 980 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 LINC00628-201ENST00000628516 1289 ntBASIC15.83■□□□□ 0.12
TREX1Q9NSU2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.83■□□□□ 0.12
TREX1Q9NSU2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 AL139400.1-201ENST00000366220 510 ntBASIC15.82■□□□□ 0.12
TREX1Q9NSU2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TREX1Q9NSU2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TREX1Q9NSU2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms