Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AC092127.1-201ENST00000567093 3455 ntBASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AC112693.3-201ENST00000624819 1983 ntBASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.04□□□□□ -0.16
KIAA1549Q9HCM3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC017083.2-201ENST00000608069 979 ntBASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC090616.6-203ENST00000579186 1945 ntBASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 GPR53P-205ENST00000457298 1084 ntBASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC124283.3-201ENST00000570869 594 ntBASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC092850.2-201ENST00000623821 2697 ntBASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KIAA1549Q9HCM3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.02□□□□□ -0.16
KIAA1549Q9HCM3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms