Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 PIN1P1-201ENST00000412108 996 ntBASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 AC008741.2-201ENST00000612792 3115 ntBASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 PCDHA1-201ENST00000378133 2726 ntBASIC18.43■□□□□ 0.54
VAT1LQ9HCJ6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 AC015922.1-201ENST00000421102 1152 ntBASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 AC190387.1-201ENST00000551683 408 ntBASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 AL603832.2-201ENST00000566195 2125 ntBASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 AC074044.1-201ENST00000609673 707 ntBASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
VAT1LQ9HCJ6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 DOC2GP-204ENST00000639052 2548 ntBASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 TIMM17BP1-201ENST00000545713 516 ntBASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 AL132655.2-201ENST00000596276 594 ntBASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VAT1LQ9HCJ6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms