Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J3Q9H1A7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
POLR2J3Q9H1A7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 AL365209.1-201ENST00000624418 6473 ntBASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 OR2I1P-210ENST00000642037 4691 ntBASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J3Q9H1A7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AC104109.2-201ENST00000602919 1418 ntBASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 RARRES2P8-201ENST00000566335 367 ntBASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AP002472.1-201ENST00000577490 586 ntBASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
POLR2J3Q9H1A7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms