Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
POLR2J2Q9GZM3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AL009178.2-201ENST00000597278 2719 ntBASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AC243562.2-201ENST00000561247 970 ntBASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
POLR2J2Q9GZM3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 AKAP8P1-201ENST00000434743 1349 ntBASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
POLR2J2Q9GZM3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 AC136621.1-201ENST00000624017 2304 ntBASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 AC006486.2-201ENST00000624246 2199 ntBASIC14.77□□□□□ -0.05
POLR2J2Q9GZM3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms