Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 AC145285.3-201ENST00000564603 959 ntBASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
THUMPD3Q9BV44 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 IGLL3P-201ENST00000412472 434 ntBASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 HCG4B-203ENST00000450128 991 ntBASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 AC245100.5-201ENST00000452108 331 ntBASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 KRT18P34-201ENST00000488218 1270 ntBASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 AC034105.1-201ENST00000563488 319 ntBASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
THUMPD3Q9BV44 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.28■□□□□ 0.04
THUMPD3Q9BV44 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms