Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 TREML5P-201ENST00000421694 576 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 BCRP1-201ENST00000444246 691 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC093214.1-201ENST00000511688 1107 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 IGHV3-42-201ENST00000520410 361 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC061975.2-201ENST00000581722 295 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AL390955.2-201ENST00000603032 514 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AC024909.3-201ENST00000611513 2257 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.16□□□□□ -0.62
UPK3BQ9BT76 FO538757.1-201ENST00000623083 1397 ntBASIC11.16□□□□□ -0.62
UPK3BQ9BT76 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AC104581.4-201ENST00000623126 3052 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AC022188.1-201ENST00000620960 1664 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 FAM8A3P-201ENST00000427218 844 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AC097493.3-201ENST00000509725 367 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MIR3197-201ENST00000582241 73 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 AC092364.2-202ENST00000597012 1073 ntBASIC11.15□□□□□ -0.62
UPK3BQ9BT76 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
UPK3BQ9BT76 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms