Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.45□□□□□ -0.26
PCGF1Q9BSM1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AL365203.3-201ENST00000609742 2057 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AC098859.1-201ENST00000502915 1238 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AC140878.1-201ENST00000565277 250 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 FO538757.1-201ENST00000623083 1397 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 AL365209.1-201ENST00000624418 6473 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
PCGF1Q9BSM1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AC126177.1-201ENST00000547829 2218 ntBASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
PCGF1Q9BSM1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms