Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDK5RAP1Q96SZ6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 AC098614.1-201ENST00000368528 745 ntBASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 AC074338.1-201ENST00000416825 156 ntBASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 AC104596.2-201ENST00000512793 793 ntBASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDK5RAP1Q96SZ6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 AL589987.1-201ENST00000453380 819 ntBASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 AC005225.4-201ENST00000557330 545 ntBASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 AC004790.1-201ENST00000612686 536 ntBASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDK5RAP1Q96SZ6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.46■□□□□ 0.23
CDK5RAP1Q96SZ6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms