Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK5RAP2Q96SN8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 MIR1202-201ENST00000408529 83 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 FO681548.1-201ENST00000455617 1132 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AC108725.1-201ENST00000495472 409 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 SAMD11P1-201ENST00000571429 661 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AC025181.2-201ENST00000606994 802 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AL138709.1-201ENST00000614840 1693 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AL158070.2-201ENST00000623713 1621 ntBASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDK5RAP2Q96SN8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 BTNL10-201ENST00000595971 695 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 KRT8P14-201ENST00000414254 1442 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC007969.1-201ENST00000433675 447 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 ZNF767P-206ENST00000513792 565 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 RNA5SP412-201ENST00000516234 123 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC079316.1-201ENST00000548397 411 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AC145423.3-201ENST00000615987 467 ntBASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDK5RAP2Q96SN8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 AC078819.1-201ENST00000547454 765 ntBASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 AC012085.1-201ENST00000548270 765 ntBASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 RN7SL560P-201ENST00000577943 264 ntBASIC18.36■□□□□ 0.53
CDK5RAP2Q96SN8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms