Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MIR770-201ENST00000390219 98 ntBASIC16.47■□□□□ 0.23
HAPLN3Q96S86 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 RNA5SP421-201ENST00000516864 134 ntBASIC16.47■□□□□ 0.23
HAPLN3Q96S86 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 HNRNPUP1-201ENST00000554987 333 ntBASIC16.47■□□□□ 0.23
HAPLN3Q96S86 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AC097359.3-201ENST00000603982 1210 ntBASIC16.47■□□□□ 0.23
HAPLN3Q96S86 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HAPLN3Q96S86 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC009477.1-201ENST00000452936 217 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC004890.2-204ENST00000481968 304 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC093214.1-201ENST00000511688 1107 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 SDHAP3-202ENST00000515467 728 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 MIR4313-201ENST00000580760 101 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 AC126177.1-201ENST00000547829 2218 ntBASIC16.46■□□□□ 0.23
HAPLN3Q96S86 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HAPLN3Q96S86 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HAPLN3Q96S86 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HAPLN3Q96S86 Z97205.2-201ENST00000564697 1639 ntBASIC16.45■□□□□ 0.22
HAPLN3Q96S86 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms