Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC009477.1-201ENST00000452936 217 ntBASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 AL109936.8-201ENST00000641772 604 ntBASIC13.21□□□□□ -0.29
GAFA1Q96PS6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAFA1Q96PS6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.21□□□□□ -0.3
GAFA1Q96PS6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 Z97205.2-201ENST00000564697 1639 ntBASIC13.21□□□□□ -0.3
GAFA1Q96PS6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.21□□□□□ -0.3
GAFA1Q96PS6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 CICP13-201ENST00000422015 2789 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC074338.1-201ENST00000416825 156 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AL512638.1-201ENST00000457493 794 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC004890.2-204ENST00000481968 304 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 SDHAP3-202ENST00000515467 728 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 ZNF890P-202ENST00000530367 1156 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC044860.1-202ENST00000559481 777 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms