Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRC46Q96FV0 AC092384.3-202ENST00000564646 2873 ntBASIC14.46□□□□□ -0.1
LRRC46Q96FV0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.46□□□□□ -0.1
LRRC46Q96FV0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SLC25A1P3-201ENST00000395415 828 ntBASIC14.45□□□□□ -0.1
LRRC46Q96FV0 KRT8P39-201ENST00000396270 1433 ntBASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SERBP1P3-201ENST00000459980 809 ntBASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SERBP1P5-201ENST00000510079 1181 ntBASIC14.45□□□□□ -0.1
LRRC46Q96FV0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC46Q96FV0 AC073439.1-201ENST00000624121 1774 ntBASIC14.45□□□□□ -0.1
LRRC46Q96FV0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AC087499.5-201ENST00000452760 1342 ntBASIC14.44□□□□□ -0.1
LRRC46Q96FV0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 RN7SL828P-201ENST00000607615 303 ntBASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 AC092068.3-201ENST00000587894 2016 ntBASIC14.44□□□□□ -0.1
LRRC46Q96FV0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC46Q96FV0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms