Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AC026471.1-201ENST00000564629 3026 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 RNF216P1-203ENST00000404404 2427 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AL133267.1-201ENST00000398220 340 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 ACTBP8-201ENST00000403258 1108 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 RN7SL48P-201ENST00000579283 293 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 NOC2LP2-201ENST00000407594 1944 ntBASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM43Q96BQ3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 TUBBP5-203ENST00000508529 1334 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AC105020.1-201ENST00000435356 2205 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 RNU1-114P-201ENST00000365297 166 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 KLF2P2-201ENST00000416807 1039 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 RN7SL774P-201ENST00000577467 290 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AL133499.1-201ENST00000596207 608 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AC244157.2-201ENST00000616239 1006 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AC079336.7-201ENST00000623428 1078 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 AC068880.1-201ENST00000507289 2297 ntBASIC17.03■□□□□ 0.32
TRIM43Q96BQ3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 AC018892.3-201ENST00000623986 2499 ntBASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 AC079178.1-201ENST00000420915 656 ntBASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 PRKXP1-201ENST00000561423 1122 ntBASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 RN7SL574P-201ENST00000581512 297 ntBASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM43Q96BQ3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms