Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 AC026691.1-201ENST00000602502 2017 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF34Q969K3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF34Q969K3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF34Q969K3 AC055876.3-201ENST00000431496 288 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 AL512638.1-201ENST00000457493 794 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF34Q969K3 HLA-V-204ENST00000476601 1289 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 AC093214.1-201ENST00000511688 1107 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF34Q969K3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 AC138649.4-201ENST00000612222 287 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 AC024909.3-201ENST00000611513 2257 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF34Q969K3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF34Q969K3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.69■□□□□ 0.26
RNF34Q969K3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF34Q969K3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF34Q969K3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF34Q969K3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF34Q969K3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RNF34Q969K3 AC010491.1-201ENST00000563101 2797 ntBASIC16.68■□□□□ 0.26
RNF34Q969K3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF34Q969K3 CDC14C-201ENST00000428251 1719 ntBASIC16.68■□□□□ 0.26
RNF34Q969K3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF34Q969K3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 MIR770-201ENST00000390219 98 ntBASIC16.68■□□□□ 0.26
RNF34Q969K3 RPL37AP1-201ENST00000412502 279 ntBASIC16.68■□□□□ 0.26
RNF34Q969K3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF34Q969K3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF34Q969K3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RNF34Q969K3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF34Q969K3 AC011467.4-201ENST00000594891 528 ntBASIC16.68■□□□□ 0.26
RNF34Q969K3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF34Q969K3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF34Q969K3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF34Q969K3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF34Q969K3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF34Q969K3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 PRAL-201ENST00000624952 3286 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 BASP1P1-201ENST00000430708 665 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 SERBP1P3-201ENST00000459980 809 ntBASIC16.67■□□□□ 0.26
RNF34Q969K3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF34Q969K3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF34Q969K3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF34Q969K3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF34Q969K3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms