Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 AL138918.1-201ENST00000568306 659 ntBASIC14.35□□□□□ -0.11
PTP4A1Q93096 MIR4313-201ENST00000580760 101 ntBASIC14.35□□□□□ -0.11
PTP4A1Q93096 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
PTP4A1Q93096 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PTP4A1Q93096 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 AC040169.1-201ENST00000565382 521 ntBASIC14.34□□□□□ -0.11
PTP4A1Q93096 AL161645.1-201ENST00000622716 1255 ntBASIC14.34□□□□□ -0.11
PTP4A1Q93096 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 BNIP3P1-202ENST00000550043 1585 ntBASIC14.34□□□□□ -0.11
PTP4A1Q93096 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.34□□□□□ -0.11
PTP4A1Q93096 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PTP4A1Q93096 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTP4A1Q93096 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PTP4A1Q93096 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PTP4A1Q93096 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.33□□□□□ -0.11
PTP4A1Q93096 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PTP4A1Q93096 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PTP4A1Q93096 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 AC098859.1-201ENST00000502915 1238 ntBASIC14.33□□□□□ -0.12
PTP4A1Q93096 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.33□□□□□ -0.12
PTP4A1Q93096 PDPK2P-202ENST00000562415 1191 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms