Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 AC008738.7-201ENST00000609744 511 ntBASIC16.83■□□□□ 0.28
ATP2A3Q93084 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 AL589702.1-201ENST00000641229 1509 ntBASIC16.83■□□□□ 0.28
ATP2A3Q93084 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATP2A3Q93084 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.83■□□□□ 0.28
ATP2A3Q93084 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.82■□□□□ 0.28
ATP2A3Q93084 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.82■□□□□ 0.28
ATP2A3Q93084 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 ZNF890P-202ENST00000530367 1156 ntBASIC16.82■□□□□ 0.28
ATP2A3Q93084 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.82■□□□□ 0.28
ATP2A3Q93084 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATP2A3Q93084 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 SERBP1P3-201ENST00000459980 809 ntBASIC16.81■□□□□ 0.28
ATP2A3Q93084 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 RN7SL618P-201ENST00000477850 296 ntBASIC16.81■□□□□ 0.28
ATP2A3Q93084 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 CR383656.12-201ENST00000549567 513 ntBASIC16.81■□□□□ 0.28
ATP2A3Q93084 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A3Q93084 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A3Q93084 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms