Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGB4Q8WW32 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 C1QBPP1-201ENST00000400117 770 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 TOMM22P5-201ENST00000416399 439 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AC099336.1-201ENST00000417053 1171 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AL355864.2-201ENST00000447420 863 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 VDAC1P7-201ENST00000462417 847 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 ENPP7P5-201ENST00000541031 1031 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AC124283.3-201ENST00000570869 594 ntBASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGB4Q8WW32 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 ALOX12P2-203ENST00000570921 1945 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC092171.3-201ENST00000610122 2651 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC005229.1-201ENST00000392885 409 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 BRWD1P1-201ENST00000401091 371 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 ACTBP11-201ENST00000436287 1126 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 PHKG1P2-201ENST00000457537 863 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AL583810.1-201ENST00000553344 1045 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC120045.2-201ENST00000567334 178 ntBASIC15.9■□□□□ 0.14
HMGB4Q8WW32 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGB4Q8WW32 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms