Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT1Q8NF37 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AC132872.4-202ENST00000622924 2756 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AC100757.3-201ENST00000622361 1406 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AC055876.3-201ENST00000431496 288 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 PHKG1P2-201ENST00000457537 863 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AL390955.2-201ENST00000603032 514 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AC138649.4-201ENST00000612222 287 ntBASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT1Q8NF37 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AL162727.3-201ENST00000635661 2787 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 HIST3H2BA-201ENST00000436555 524 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 RN7SL618P-201ENST00000477850 296 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AC093214.1-201ENST00000511688 1107 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AC005498.2-205ENST00000593218 784 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 CICP6-201ENST00000457191 2729 ntBASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LPCAT1Q8NF37 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms