Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AL358472.5-202ENST00000641448 1267 ntBASIC16.78■□□□□ 0.28
TTC16Q8NEE8 AL033527.5-202ENST00000641632 1098 ntBASIC16.78■□□□□ 0.28
TTC16Q8NEE8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 AL136982.4-201ENST00000437689 1740 ntBASIC16.78■□□□□ 0.28
TTC16Q8NEE8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC16Q8NEE8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
TTC16Q8NEE8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TTC16Q8NEE8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.76■□□□□ 0.27
TTC16Q8NEE8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 GAPDHP21-201ENST00000450301 1010 ntBASIC16.76■□□□□ 0.27
TTC16Q8NEE8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 AC008494.3-201ENST00000606615 944 ntBASIC16.76■□□□□ 0.27
TTC16Q8NEE8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 MIR6069-201ENST00000620069 79 ntBASIC16.76■□□□□ 0.27
TTC16Q8NEE8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.76■□□□□ 0.27
TTC16Q8NEE8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC16Q8NEE8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TTC16Q8NEE8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms