Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 AC107373.2-201ENST00000607735 490 ntBASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
CARMIL3Q8ND23 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 AL607033.1-201ENST00000623900 1599 ntBASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 IGHJ2P-201ENST00000454480 60 ntBASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 DRD5P1-201ENST00000456605 1438 ntBASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.74■□□□□ 0.75
CARMIL3Q8ND23 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AC025279.2-201ENST00000569730 653 ntBASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AC093813.1-201ENST00000605066 256 ntBASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CARMIL3Q8ND23 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.72■□□□□ 0.75
CARMIL3Q8ND23 KRT8P13-201ENST00000463294 1010 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms