Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 BASP1P1-201ENST00000430708 665 ntBASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 AL512638.1-201ENST00000457493 794 ntBASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 RN7SL618P-201ENST00000477850 296 ntBASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB42Q8N4Z0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 REXO1L1P-202ENST00000608646 1974 ntBASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 AC097376.2-205ENST00000610159 5334 ntBASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB42Q8N4Z0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 AC024909.3-201ENST00000611513 2257 ntBASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 AC241585.1-201ENST00000433527 519 ntBASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 EEF1DP4-201ENST00000446006 880 ntBASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 AL138828.2-201ENST00000615812 383 ntBASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB42Q8N4Z0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 AL080243.2-201ENST00000418783 582 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 CYMP-203ENST00000474680 1263 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 AC097493.3-201ENST00000509725 367 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 DUX4L27-201ENST00000554796 1261 ntBASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
RAB42Q8N4Z0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms