Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS52Q8N1B4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 AC068418.2-201ENST00000577309 3703 ntBASIC17.3■□□□□ 0.36
VPS52Q8N1B4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.3■□□□□ 0.36
VPS52Q8N1B4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS52Q8N1B4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 HLA-V-201ENST00000429037 534 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC023310.3-201ENST00000557027 670 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC100756.1-201ENST00000562736 682 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC138749.3-201ENST00000567691 622 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC116165.1-201ENST00000611806 668 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.29■□□□□ 0.36
VPS52Q8N1B4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS52Q8N1B4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS52Q8N1B4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms