Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AL592424.1-201ENST00000563624 1536 ntBASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AC012569.1-201ENST00000591191 1524 ntBASIC14.98□□□□□ -0.01
CCDC71Q8IV32 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 COX20P2-201ENST00000452636 358 ntBASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 IGHV3-62-201ENST00000520057 340 ntBASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 AC005412.3-201ENST00000580309 715 ntBASIC14.98□□□□□ -0.01
CCDC71Q8IV32 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC71Q8IV32 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SPCS2P4-201ENST00000436160 681 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 RBPMS2P1-201ENST00000437762 623 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 CNN2P2-201ENST00000443536 909 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 CNN2P3-201ENST00000450201 906 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AC091167.2-201ENST00000579581 588 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AL136317.3-201ENST00000618497 906 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AL161645.1-201ENST00000622716 1255 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 TMBIM7P-203ENST00000641617 1718 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 AC023908.3-201ENST00000564211 3047 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 UXT-AS1-201ENST00000590504 1525 ntBASIC14.97□□□□□ -0.01
CCDC71Q8IV32 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC71Q8IV32 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms