Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NIPAL3Q6P499 AC011477.6-201ENST00000604980 1927 ntBASIC14.54□□□□□ -0.08
NIPAL3Q6P499 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 AL109954.1-202ENST00000564051 2148 ntBASIC14.54□□□□□ -0.08
NIPAL3Q6P499 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 AC022145.2-201ENST00000598203 171 ntBASIC14.54□□□□□ -0.08
NIPAL3Q6P499 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
NIPAL3Q6P499 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AC005237.2-201ENST00000434368 219 ntBASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL3Q6P499 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms