Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 PTCHD3P3-201ENST00000403073 906 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 HCG4-201ENST00000418983 998 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 SLC25A6P2-201ENST00000497974 877 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 KRT18P56-201ENST00000507275 550 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AC139887.3-201ENST00000568585 713 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AC005412.3-201ENST00000580309 715 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 CLEC4GP1-201ENST00000596555 870 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AL355877.3-201ENST00000622820 899 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AC012313.10-201ENST00000623509 926 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 AC138969.2-201ENST00000532739 9932 ntBASIC12.73□□□□□ -0.37
FAM78BQ5VT40 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FAM78BQ5VT40 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.72□□□□□ -0.37
FAM78BQ5VT40 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SCARNA2-201ENST00000458748 420 ntBASIC12.72□□□□□ -0.37
FAM78BQ5VT40 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 REXO1L6P-202ENST00000619970 1078 ntBASIC12.72□□□□□ -0.37
FAM78BQ5VT40 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
FAM78BQ5VT40 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms