Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AC132008.2-207ENST00000454517 770 ntBASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 IFNL4P1-201ENST00000607083 540 ntBASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AL805961.1-202ENST00000641562 540 ntBASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AC129492.6-201ENST00000611383 1305 ntBASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ANKRD55Q3KP44 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AC106795.1-205ENST00000512851 1056 ntBASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AC012313.10-201ENST00000623509 926 ntBASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 AC126365.1-201ENST00000578585 1514 ntBASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms