Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL1Q00532 AC022145.2-201ENST00000598203 171 ntBASIC15.71■□□□□ 0.11
CDKL1Q00532 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDKL1Q00532 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.71■□□□□ 0.11
CDKL1Q00532 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.71■□□□□ 0.11
CDKL1Q00532 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDKL1Q00532 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKL1Q00532 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CDKL1Q00532 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKL1Q00532 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDKL1Q00532 TCAF2P1-201ENST00000291129 2421 ntBASIC15.7■□□□□ 0.1
CDKL1Q00532 AC023908.3-201ENST00000564211 3047 ntBASIC15.7■□□□□ 0.1
CDKL1Q00532 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKL1Q00532 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKL1Q00532 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.7■□□□□ 0.1
CDKL1Q00532 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.7■□□□□ 0.1
CDKL1Q00532 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 AL513210.1-201ENST00000629608 234 ntBASIC15.7■□□□□ 0.1
CDKL1Q00532 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.7■□□□□ 0.1
CDKL1Q00532 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.7■□□□□ 0.1
CDKL1Q00532 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDKL1Q00532 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL1Q00532 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDKL1Q00532 UXT-AS1-201ENST00000590504 1525 ntBASIC15.69■□□□□ 0.1
CDKL1Q00532 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.69■□□□□ 0.1
CDKL1Q00532 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 AC004987.2-201ENST00000395959 1148 ntBASIC15.69■□□□□ 0.1
CDKL1Q00532 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL1Q00532 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.69■□□□□ 0.1
CDKL1Q00532 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL1Q00532 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDKL1Q00532 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.69■□□□□ 0.1
CDKL1Q00532 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL1Q00532 SLC25A39P2-201ENST00000537614 270 ntBASIC15.69■□□□□ 0.1
CDKL1Q00532 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.69■□□□□ 0.1
CDKL1Q00532 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.69■□□□□ 0.1
CDKL1Q00532 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.69■□□□□ 0.1
CDKL1Q00532 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms