Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AKAP8P1-201ENST00000434743 1349 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 MIR574-201ENST00000385209 96 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AL022342.1-201ENST00000400363 863 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HOXC5Q00444 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 AC243562.1-201ENST00000560672 389 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC5Q00444 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.78□□□□□ -0.04
HOXC5Q00444 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 AC011477.6-201ENST00000604980 1927 ntBASIC14.78□□□□□ -0.04
HOXC5Q00444 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HOXC5Q00444 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HOXC5Q00444 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
HOXC5Q00444 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXC5Q00444 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 FAM45BP-202ENST00000592932 1624 ntBASIC14.77□□□□□ -0.04
HOXC5Q00444 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HOXC5Q00444 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.77□□□□□ -0.04
HOXC5Q00444 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HOXC5Q00444 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HOXC5Q00444 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HOXC5Q00444 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HOXC5Q00444 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HOXC5Q00444 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 ADH5P3-201ENST00000433842 1137 ntBASIC14.77□□□□□ -0.05
HOXC5Q00444 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXC5Q00444 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 PGAM5P1-201ENST00000518923 814 ntBASIC14.77□□□□□ -0.05
HOXC5Q00444 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 AC061975.2-201ENST00000581722 295 ntBASIC14.77□□□□□ -0.05
HOXC5Q00444 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.77□□□□□ -0.05
HOXC5Q00444 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 AC008267.7-201ENST00000624570 1194 ntBASIC14.77□□□□□ -0.05
HOXC5Q00444 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HOXC5Q00444 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HOXC5Q00444 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
HOXC5Q00444 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.76□□□□□ -0.05
HOXC5Q00444 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms