Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 AC106881.1-201ENST00000605849 3329 ntBASIC13.18□□□□□ -0.3
SRPXP78539 AC092127.1-201ENST00000567093 3455 ntBASIC13.18□□□□□ -0.3
SRPXP78539 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
SRPXP78539 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.17□□□□□ -0.3
SRPXP78539 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.17□□□□□ -0.3
SRPXP78539 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.17□□□□□ -0.3
SRPXP78539 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.17□□□□□ -0.3
SRPXP78539 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 TMPOP1-202ENST00000424642 1267 ntBASIC13.17□□□□□ -0.3
SRPXP78539 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.17□□□□□ -0.3
SRPXP78539 KRT18P34-201ENST00000488218 1270 ntBASIC13.17□□□□□ -0.3
SRPXP78539 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.17□□□□□ -0.3
SRPXP78539 AC136632.2-201ENST00000512891 861 ntBASIC13.17□□□□□ -0.3
SRPXP78539 SART3-203ENST00000546611 1184 ntBASIC13.17□□□□□ -0.3
SRPXP78539 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.17□□□□□ -0.3
SRPXP78539 AL645728.2-201ENST00000641974 660 ntBASIC13.17□□□□□ -0.3
SRPXP78539 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SRPXP78539 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.17□□□□□ -0.3
SRPXP78539 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRPXP78539 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.17□□□□□ -0.3
SRPXP78539 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.16□□□□□ -0.3
SRPXP78539 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SRPXP78539 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.16□□□□□ -0.3
SRPXP78539 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SRPXP78539 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.16□□□□□ -0.3
SRPXP78539 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SRPXP78539 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.16□□□□□ -0.3
SRPXP78539 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRPXP78539 MRPL20P1-201ENST00000400819 433 ntBASIC13.16□□□□□ -0.3
SRPXP78539 AL645939.2-201ENST00000427340 991 ntBASIC13.16□□□□□ -0.3
SRPXP78539 FGFR3P6-201ENST00000457012 610 ntBASIC13.16□□□□□ -0.3
SRPXP78539 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.16□□□□□ -0.3
SRPXP78539 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.16□□□□□ -0.3
SRPXP78539 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms